Table 3 Summary of the clusters (rank 1 to 4) resulted from the cluster analysis of the subnetwork of the overexpressed genes in Gastric Cancer plus their known neighbors based on data provided in our previous studies [12,13,14] using the CytoCluster App
Cluster Rank | Nodes | Edges | Pathways |
|---|---|---|---|
1 | 33 | 405 | Oxidative phosphorylation Parkinson disease Thermogenesis Prion disease Huntington disease Amyotrophic lateral sclerosis Alzheimer disease Non-alcoholic fatty liver disease Metabolic pathways Cardiac muscle contraction Ribosome Retrograde endocannabinoid signaling |
2 | 32 | 391 | Oxidative phosphorylation Thermogenesis Parkinson disease Prion disease Huntington disease Amyotrophic lateral sclerosis Alzheimer disease Non-alcoholic fatty liver disease Metabolic pathways Cardiac muscle contraction Ribosome Retrograde endocannabinoid signaling |
3 | 30 | 342 | Oxidative phosphorylation Thermogenesis Parkinson disease Prion disease Huntington disease Amyotrophic lateral sclerosis Alzheimer disease Non-alcoholic fatty liver disease Metabolic pathways Cardiac muscle contraction Retrograde endocannabinoid signaling Ribosome DNA replication |
4 | 26 | 284 | Oxidative phosphorylation Thermogenesis Parkinson disease Prion disease Huntington disease Amyotrophic lateral sclerosis Alzheimer disease Metabolic pathways Non-alcoholic fatty liver disease Cardiac muscle contraction Retrograde endocannabinoid signaling |