Table 1 Table of differential analysis results for 8 candidate genes in the 3 datasets
TCGA and GTEx | GSE62452 | GSE28735 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Gene | log(fold-change) | p-value | change | Gene | log(fold-change) | p-value | change | Gene | log(fold-change) | p-value | change |
ANKRD22 | 1.28 | 4.38E-22 | up | ANKRD22 | 1.14 | 2.78E-08 | up | ANKRD22 | 1.58 | 1.10E-10 | up |
ARNTL2 | 1.94 | 2.39E-54 | up | ARNTL2 | 1.08 | 3.90E-12 | up | ARNTL2 | 1.26 | 9.10E-11 | up |
DSG3 | 1.14 | 6.86E-24 | up | DSG3 | 1.04 | 1.97E-06 | up | DSG3 | 1.01 | 1.17E-04 | up |
ITGB6 | 1.91 | 1.80E-37 | up | ITGB6 | 2.02 | 2.66E-13 | up | ITGB6 | 2.08 | 2.98E-11 | up |
KRT7 | 2.42 | 6.59E-36 | up | KRT7 | 1.49 | 3.49E-10 | up | KRT7 | 1.68 | 1.27E-08 | up |
MET | 2.45 | 2.22E-49 | up | MET | 1.35 | 2.14E-13 | up | MET | 1.48 | 5.01E-12 | up |
PRSS3 | -4.86 | 2.34E-47 | down | PRSS3 | -1.25 | 4.34E-06 | down | PRSS3 | -1.21 | 1.02E-04 | down |
TRHDE | -1.46 | 6.39E-48 | down | TRHDE | -1.61 | 1.77E-08 | down | TRHDE | -1.68 | 5.25E-07 | down |