Table 7 The evaluation of refined models by 4 onlien programs
HCV | Models | Qmean | ERRAT | ProSA-web | Rampage (Ramachandran plot) |
|---|---|---|---|---|---|
NS5A 1a | 1 |  − 0.89 | 72.8507 |  − 4.72 | 94.3%, 3.5% |
2 |  − 0.45 | 69.6833 |  − 4.58 | 93.8%, 3.5% | |
3 |  − 1.12 | 68.1818 |  − 4.49 | 93.8%, 4.0% | |
4 |  − 0.9 | 69.6833 |  − 4.7 | 93.8%, 3.5% | |
5 |  − 0.59 | 70.5882 |  −  4.75 | 93.8%, 4.4% | |
Itasser |  − 4.64 | 78.733 | NA | 85.9%, 8.4% | |
NS5A 3a | 1 |  − 4.45 | 85.3333 |  − 4.48 | 88.7%, 6.5% |
2 |  − 4.09 | 85.7143 |  − 4.55 | 89.2%, 6.5% | |
3 |  − 4.46 | 87.0536 |  − 4.58 | 88.7%, 6.9% | |
4 |  − 3.98 | 80.8889 |  − 4.43 | 88.7%, 6.9% | |
5 |  − 4.34 | 86.6667 |  − 4.53 | 89.2%, 6.5% | |
Itasser |  − 6.56 | 86.2222 | na | 73.2%, 18.2% | |
NS5B 1a | 1 |  − 1.06 | 83.737 |  − 10.85 | 96.3%, 3.2% |
2 |  − 1.14 | 88 |  − 10.85 | 96.1%, 3.2% | |
3 |  − 1.19 | 89.4464 |  − 10.79 | 95.6%, 4.1% | |
4 |  − 1.16 | 85.4167 |  − 10.71 | 96.1%, 3.2% | |
5 |  − 1.10 | 86.8284 |  − 10.82 | 95.6%, 3.7% | |
Itasser |  − 4.17 | 93.1389 | na | 87.3%, 8.7% | |
NS5B 3a | 1 |  − 1.26 | 86.7241 |  − 11.59 | 96.6%, 2.9% |
2 |  − 1.06 | 92.6117 |  − 11.35 | 96.6%, 3.1% | |
3 |  − 1.37 | 91.7241 |  − 11.49 | 96.6%,2.9% | |
4 |  − 1.25 | 93.1271 |  − 11.38 | 96.%, 2.7% | |
5 |  − 1.11 | 92.4138 |  − 11.23 | 96.8%,2.7% | |
Itasser |  − 4.29 | 94.3493 | na | 87.1%, 9.3% |