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Table.3 Metadata association with microbiota composition variation (Bray–Curtis distance, Genus level) by permutational multivariate analysis of variance

From: Comparison of sampling methods in assessing the microbiome from patients with ulcerative colitis

  df Stool Lavage Colontissue
pseudo-F r2 P-value pseudo-F r2 P-value pseudo-F r2 P-value
Birthmonth 1 0.496807 0.017434 0.963 0.30401 0.010741 0.988 0.893998 0.064344 0.587
Bristol stool 1 1.615966 0.054564 0.09 1.126012 0.03866 0.338 0.591071 0.04349 0.923
Complication 1 0.978535 0.070003 0.404 1.660764 0.11328 0.132 0.835214 0.094532 0.66
Drinking 1 0.904672 0.031298 0.532 0.629747 0.021996 0.741 0.810813 0.058709 0.709
Extraintestinal 1 1.317045 0.091991 0.133 2.485206 0.160489 0.02 0.928086 0.103951 0.494
Fermentedfood 1 0.77691 0.026998 0.666 1.408026 0.047879 0.159 1.137492 0.080459 0.284
Surgery history 1 0.850101 0.029466 0.567 1.764313 0.059276 0.079 1.232748 0.086613 0.191
Age 1 1.33408 0.045479 0.169 1.187432 0.040683 0.266 0.671462 0.049114 0.876
Birthyear 1 1.341552 0.045722 0.17 1.239168 0.04238 0.226 0.662354 0.04848 0.899
BMI 1 1.382341 0.047047 0.17 0.595062 0.02081 0.798 1.964587 0.131282 0.015
Hostcategory 1 2.348238 0.077376 0.013 1.072956 0.036906 0.31 1.07396 0.076308 0.336
Height 1 1.610117 0.054377 0.085 0.387902 0.013664 0.954 0.483476 0.035857 0.981
Sex 1 0.943593 0.032601 0.467 0.733253 0.025519 0.651 0.707142 0.051589 0.852
Weight 1 1.24015 0.042413 0.237 0.591836 0.020699 0.796 1.821861 0.122917 0.025
Hypertension 1 0.428682 0.015079 0.986 0.724504 0.025222 0.662 0.715157 0.052144 0.839
LesionE1, E23 1 0.833943 0.060282 0.646 0.556671 0.041062 0.865 0.772521 0.088061 0.731
LesionE1, E2, E3 2 1.534195 0.203631 0.053 0.702836 0.104857 0.775 1.097036 0.23864 0.359
Medication 1 0.662934 0.023129 0.789 0.6435 0.022466 0.727 0.729636 0.053143 0.818
Ordernumber 8 1.273526 0.326669 0.099 1.151589 0.304928 0.215 1.450733 0.446279 0.02
Pastdisease 9 0.751518 0.252718 0.882 0.887925 0.285493 0.683 0.818017 0.44995 0.899
Period 1 0.954267 0.068385 0.507 1.564211 0.107401 0.122 0.927049 0.103847 0.529
Probiotics 1 0.632417 0.022087 0.839 0.587319 0.020545 0.815 1.1144 0.078955 0.289
Probiotics 1 0.763851 0.026556 0.692 0.634697 0.022165 0.729 1.329072 0.092754 0.139
Samplingdate 8 1.273526 0.326669 0.11 1.151589 0.304928 0.228 1.450733 0.446279 0.032
Smoking 1 0.895662 0.030996 0.489 2.138451 0.070954 0.041 0.859489 0.062014 0.663
Stoolcolor 3 1.27103 0.1279 0.178 0.880472 0.092224 0.592 1.086841 0.22864 0.331
Stooltype 5 1.000135 0.172433 0.46 0.722303 0.130797 0.91 1.107801 0.380976 0.275
Sugarydrink 1 1.472612 0.049965 0.117 0.863336 0.029911 0.506 1.126826 0.079765 0.286
Sugarysnack 1 0.816938 0.028349 0.628 1.283086 0.043817 0.248 0.799636 0.057946 0.727
Surgery 5 1.509554 0.239249 0.053 1.723835 0.264236 0.004 1.419619 0.279107 0.046
Active UC 1 2.21661 0.073357 0.024 1.015076 0.034984 0.346 1.061837 0.075512 0.358
UC activity 1 1.965438 0.131332 0.046 0.693475 0.050643 0.692 0.710533 0.081572 0.811
  1. BMI: body mass index; df; degrees of freedom; E1, E2,E3: disease localization by Montreal classification; UC: ulcerative colitis