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Table 2 Number of sequence reads derived from rectum samples

From: Deficiency of Gankyrin in the small intestine is associated with augmented colitis accompanied by altered bacterial composition of intestinal microbiota

Treatment

Mice

Pairs of raw reads

Merged reads

Reads in OTUs

Untreated

GKf/f

108,219

93,088

57,378

119,144

104,912

64,302

132,543

116,104

56,395

Villin-Cre;GKf/f

166,120

141,459

71,663

177,145

150,617

88,569

153,489

130,854

65,596

DSS-treated

GKf/f

158,088

140,514

82,872

162,429

146,540

85,937

146,585

129,640

72,774

96,962

91,832

66,395

82,258

76,967

51,798

67,262

64,477

47,707

Villin-Cre;GKf/f

146,398

129,707

76,916

149,141

133,210

70,468

129,604

117,091

60,096

64,784

61,357

40,852

58,762

55,256

41,103

69,251

64,639

40,453

Total

 

2,188,184

1,948,264

1,141,274