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Table 2 Number of sequence reads derived from rectum samples

From: Deficiency of Gankyrin in the small intestine is associated with augmented colitis accompanied by altered bacterial composition of intestinal microbiota

Treatment Mice Pairs of raw reads Merged reads Reads in OTUs
Untreated GKf/f 108,219 93,088 57,378
119,144 104,912 64,302
132,543 116,104 56,395
Villin-Cre;GKf/f 166,120 141,459 71,663
177,145 150,617 88,569
153,489 130,854 65,596
DSS-treated GKf/f 158,088 140,514 82,872
162,429 146,540 85,937
146,585 129,640 72,774
96,962 91,832 66,395
82,258 76,967 51,798
67,262 64,477 47,707
Villin-Cre;GKf/f 146,398 129,707 76,916
149,141 133,210 70,468
129,604 117,091 60,096
64,784 61,357 40,852
58,762 55,256 41,103
69,251 64,639 40,453
Total   2,188,184 1,948,264 1,141,274