Gene | Product size [bp] | Oligonucleotide sequence |
---|---|---|
hlyA | 1177 | GTA TAC ACA AAA GAA GGA AGC |
 |  | ACA GAA TCG TCA GCA TCA GC |
iroN | 667 | AAG TCA AAG CAG GGG TTG CCC G |
 |  | GACGCCGACATTAAGACGCAG |
iutA | 302 | GGC TGG ACA TCA TGG GAA CTG G |
 |  | CGT CGG GAA CGG GTA GAA TCG |
iha | 829 | CTG GCG GAG GCT CTG AGA TCA |
 |  | TCC TTA AGC TCC CGC GGC TGA |
ireA | 254 | GAT GAC TCA GCC ACG GGT AA |
 |  | CCA GGA CTCA CCT CAC GAA T |
chuA | 279 | GAC GAA CCA ACG GTC AGG AT |
 |  | TGC CGC CAG TAC CAA AGA CA |
Primers and probe specific for E. coli strains (Real-time PCR) | ||
16S rRNA | 204 | GGG AGT AAA GTT AAT ACC TTT GC |
 |  | CTC AAG CTT GCC AGT ATC AG |
Probe | Â | HEX- CGC GAT CAC TCC GTG CCA GCA GCC GCG GAT CGC G -BHQ1 |