Skip to main content

Table 1 Top 10 nodes (genes) connected with many other nodes observed in networks of hepatocellular carcinoma (HCC)

From: Two differentially methylated region networks in nonalcoholic fatty liver disease, viral hepatitis, and hepatocellular carcinoma

GSE89852

GSE56588

Node (gene)

No. of edges (%)

Node (gene)

No. of edges (%)

SHANK2

81 (9.8)

FABP1

82 (9.9)

SGK2

54 (6.6)

SGK2

79 (9.5)

FABP1

51 (6.2)

FERMT3

61 (7.3)

TBC1D16

50 (6.1)

DYNC1I1

54 (6.5)

PSD4

33 (4.0)

LBX2-AS1

53 (6.4)

NCOR2

31 (3.8)

HNF4A

44 (5.3)

HNF4A

28 (3.4)

RBP5_2

39 (4.7)

FOXP2

27 (3.3)

ALPL

25 (3.0)

IGR2

27 (3.3)

C12orf74

12 (1.4)

IGR3

27 (3.3)

MIR192;MIR194-2

10 (1.2)

Total

824 (100)

 

832 (100)

  1. IGR intergenic region