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Table 1 Top 10 nodes (genes) connected with many other nodes observed in networks of hepatocellular carcinoma (HCC)

From: Two differentially methylated region networks in nonalcoholic fatty liver disease, viral hepatitis, and hepatocellular carcinoma

GSE89852 GSE56588
Node (gene) No. of edges (%) Node (gene) No. of edges (%)
SHANK2 81 (9.8) FABP1 82 (9.9)
SGK2 54 (6.6) SGK2 79 (9.5)
FABP1 51 (6.2) FERMT3 61 (7.3)
TBC1D16 50 (6.1) DYNC1I1 54 (6.5)
PSD4 33 (4.0) LBX2-AS1 53 (6.4)
NCOR2 31 (3.8) HNF4A 44 (5.3)
HNF4A 28 (3.4) RBP5_2 39 (4.7)
FOXP2 27 (3.3) ALPL 25 (3.0)
IGR2 27 (3.3) C12orf74 12 (1.4)
IGR3 27 (3.3) MIR192;MIR194-2 10 (1.2)
Total 824 (100)   832 (100)
  1. IGR intergenic region