Skip to main content

Table 1 UGT1A1 gene primers used in PCR and Sequencing

From: A case report of a novel 22 bp duplication within exon 1 of the UGT1A1 in a Sudanese infant with Crigler-Najjar syndrome type I

Region

Primer Name

Primer sequence

Annealing

Temp.

Amplicon size bp

Promoter

UGT1A1- P-F

AACTCCCTGCTACCTTTGTGGA

60

473

 

UGT1A1- P-R

TGATCACACGCTGCAGGAAAGA

  

Exon1

UGT1A1-E1A-F

AGGAGCAAAGGCGCCATGGCT

60

528

 

UGT1A1-E1A-R

GAAGAATACAGTGGGCAGAGAC

  
 

UGT1A1-E1B-F

CATGCTGACGGACCCTTT

54

588

 

UGT1A1-E1B-R

GATGCCAAAGACAGACTCAAAC

  

Exon 2

UGT1A1-E2-F

CTCAAACACGCATGCCTTTAAT

54

322

 

UGT1A1-E2-R

GAAGCTGGAAGTCTGGGATTAG

  

Exon 3

UGT1A1-E3-F

AAGACTGTTCCTTCAGAGGAC

58

283

 

UGT1A1-E3-R

AGCTCAACAATCCTTTAGAATAGC

  

Exon 4

UGT1A1-E4-F

TGCAAGGGCATGTGAGTAA

56

432

 

UGT1A1-E4-R

GAAACAACGCTATTAAATGCTAG

  

Exon 5

UGT1A1-E5-F

GCCATGAGCATAAAGAGAGGAT

60

597

 

UGT1A1-E5-R

CCTGATCAAAGACACCAGAGG

  
  1. PCR conditions: PCR reaction mixture (10 μL) contained 1 µL of genomic DNA, 0.25 μL of each forward and reverse primer (diluted to 10 μmol/L), 3.5 μL of ddH2O, 5 μL of 2 × Taq PCR Master Mix (Emerald GT mix, Clontech). PCR was implemented by denaturation at 94 °C for 10 s, followed by 40 thermal cycles composed of 98 °C for 30 s, 60 °C(promoter) for 30 s, and 72 °C for 1 min, with a final extension at 72 °C for 10 min