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Table 1 Number of sequence reads derived from caecum samples

From: Deficiency of Gankyrin in the small intestine is associated with augmented colitis accompanied by altered bacterial composition of intestinal microbiota

Treatment Mice Pairs of raw reads Merged reads Reads in OTUs
Untreated GKf/f 45,733 37,945 19,828
153,593 134,494 69,296
146,664 127,381 67,536
Villin-Cre;GKf/f 138,984 116,816 52,554
205,983 173,395 81,165
174,592 151,042 77,839
DSS-treated GKf/f 111,473 89,718 67,125
82,429 62,535 47,108
86,110 82,334 47,630
322,471 309,961 165,065
256,380 245,169 142,468
Villin-Cre;GKf/f 170,690 147,242 85,464
109,655 96,143 59,270
118,801 104,575 48,277
215,726 185,793 101,640
94,345 90,886 54,584
424,553 403,679 265,611
Total   2,858,182 2,559,108 1,452,460