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Table 1 Oligo sequences

From: In-depth characterization of the Wnt-signaling/β-catenin pathway in an in vitro model of Barrett’s sequence

Name

Forward

Reverse

Reference

Length (bp)

Wnt3a

ATGAGCGTGTCACTGCAAAG

TGTTGGGCCACAGTATTCCT

NM_033131

302

Wnt5a

AGAAGAAACTGTGCCACTTGTATCAG

CCTTCGATGTCGGAATTGATACT

NM_003392

101

Fzd1

ATCGAAGCCAACTCACAGTATTT

CACGTTGTTAAGCCCCACG

NM_003505

135

Fzd2

GACCAGGTGAGGATCCAGAG

AGCTACAAGTTTCTGGGCGA

NM_001466

122

Fzd3

TCAAGTCTGGACGACTCATTTG

GCATCTGGGAAACAACGTG

NM_017412

93

Fzd4

TCTTCTCTGTGCACATTGGC

GACAACTTTCACACCGCTCA

NM_012193

92

Fzd5

GAGAGACGGTTAGGGCTCG

GTGACCCAGGGACGGAG

NM_003468

104

Fzd6

ATTCCAGATTTGCGAGAGGA

AAAATGGCCTACAACATGACG

NM_003506

106

Fzd7

GTCGTGTTTCATGATGGTGC

CGCCTCTGTTCGTCTACCTC

NM_003507

92

Fzd8

GACACGAAGAGGTAGCAGGC

CACCGTCTCCACCTTCCTTA

NM_031866

90

Fzd9

AAGTCCATGTTGAGGCGTTC

GAAGCTGGAGAAGCTCATGG

NM_0035.8

108

Fzd10

CAACCAAGAAAAGCACCACA

TATGAGATCCCTGCCCAGTC

NM_007197

98

LRP5

GAGATCCTCCGTAGGTCCGT

CCAAGCGAGCCTTTCTACAC

NM_002335

128

LRP6

AGCGACTTGAACCATCCATT

GAGTTGGATCAACCCAGAGC

NM_002336

115

Axin2

GCAGATCCGAGAGGATGAAG

GGAGTGGTACTGCGAATGGT

NM_004655

250

CyclinD1

GGCGGATTGGAAATGAACTT

TCCTCTCCAAAATGCCAGAG

NM_053056

109

β-Actin

CACTCTTCCAGCCTTCCTTC

GGTGTAACGCAACTAAGTCATAG

NM_001101.3

378