Gene | Primer name | Primer sequence (5′ → 3′) a | PCR product size | Reference |
---|---|---|---|---|
cagA | cagA-F | GATAACAGGCAAGCTTTTGAGG | 349 | [45] |
cagA-R | CTGCAAAAGATTGTTTGGCAGA | [45] | ||
s1a | S1a-F | TCTYGCTTTAGTAGGAGC | 212 | [45] |
VA1-R | CTGCTTGAATGCGCCAAAC | [45] | ||
s1b | SS3-R | AGCGCCATACCGCAAGAG | 187 | [45] |
VA1-R | CTGCTTGAATGCGCCAAAC | [45] | ||
s1c | S1c-F | CTYGCTTTAGTRGGGYTA | 213 | [45] |
VA1-R | CTGCTTGAATGCGCCAAAC | [45] | ||
s2 | SS2-F | GCTAACACGCCAAATGATCC | 199 | [46] |
VA1-R | CTGCTTGAATGCGCCAAAC | [46] | ||
m1 | VA3-F | GGTCAAAATGCGGTCATGG | 290 | [47] |
VA3-R | CCATTGGTACCTGTAGAAAC | [47] | ||
m2 | VA4-F | GGAGCCCCAGGAAACATTG | 352 | [47] |
VA4-R | CATAACTAGCGCCTTGCAC | [47] | ||
iceA1 | iceA1-F | GTGTTTTTAACCAAAGTATC | 247 | [48] |
iceA1-R | CTATAGCCASTYTCTTTGCA | [48] | ||
iceA2 | iceA2-F | GTTGGGTATATCACAATTTAT | 229/334 | [48] |
iceA2-R | TTRCCCTATTTTCTAGTAGGT | [48] | ||
cag empty site | Luni1 | ACATTTTGGCTAAATAAACGCTG | 550 | [49] |
R5280 | GGTTGCACGCATTTTCCCTTAATC | [49] |