Table 2 Primers used in this study
From: The dual role of Escherichia coli in the course of ulcerative colitis
Gene | Primers sequences | Product size [bp] |
|---|---|---|
16S rRNA | 5′-GGG AGT AAA GTT AAT ACC TTT GC-3′ 5′-CTC AAG CTT GCC AGT ATC AG-3′ | 204 |
katE | 5′-AAC GAG TGA GGC TTT ACC TGC-3′ 5′-AAC CTG AAA CTC TGC ACA ACG-3′ | 173 |
katG | 5′-CTG CGT TTT GAT CCT GAG TTC–3′ 5′-GGC CCG ATG TAG CGA GAT T-3′ | 137 |
feoB | 5′-CGT GTA GGT AAC TGG GCT GGC-3′ 5′-AGG TCT GCG ATG AGA TGG TGG-3′ | 127 |
fepA | 5′-AGC TGA CTG ACA GCA CCA TCG-3′ 5′-CGG GAT GAT CGA CAA ACG GTC G-3′ | 554 |
fhuA | 5′-AGA CAC TAT CAC CGT TAC CGC TG-3′ 5′- GCC GCG AAT GAT CAG GTG GTC-3′ | 265 |
fecA | 5′-AGG TTA ATA TCG CAC CGG GAT CG-3′ 5′-ATG GCA TCC ATG TTG CCG AGC-3′ | 565 |
iroN | 5′-AAG TCA AAG CAG GGG TTG CCC G-3′ 5′-GAC GCC GAC ATT AAG ACG CAG-3′ | 667 |
fyuA | 5′-GCA GTA GGC ACG ATG TTG TA-3′ 5′-TGA TTA ACC CCG CGA CGG GAA-3′ | 377 |
iutA | 5′-GGC TGG ACA TCA TGG GAA CTG G-3′ 5′-CGT CGG GAA CGG GTA GAA TCG-3′ | 302 |