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Table 3 Results for the top 10 nuclear SNPs on chromosome 3 according to p value for interaction with rs2853495, sorted by chromosomal positions

From: Male-specific association between MT-ND4 11719 A/G polymorphism and ulcerative colitis: a mitochondria-wide genetic association study

Chra Nuclear SNP BPb A1c p Gene
Nucleard Mitoe Interactionf
3 rs7620175 35155767 T 6.58⋅10−02 4.25⋅10−01 8.47⋅10−06 LOC101928135
rs12493494 60412390 T 1.41⋅10−03 4.37⋅10−06 1.57⋅10−05 FHIT
rs505014 62731917 G 2.12⋅10−04 1.11⋅10−01 5.78⋅10−05 CADPS
rs498746 62731985 T 2.64⋅10−04 1.48⋅10−01 9.26⋅10−05 CADPS
rs4676732 121314320 T 2.74⋅10−02 9.31⋅10−02 6.99⋅10−05 FBXO40
rs6784995 122938098 A 7.04⋅10−04 9.13⋅10−07 3.37⋅10−05 SEC22A
rs9289215 122962809 A 2.72⋅10−03 1.37⋅10−06 8.36⋅10−05 SEC22A
rs6784930 123001494 A 1.76⋅10−02 1.21⋅10−06 1.03⋅10−05 ADCY5
rs17809756 159630084 A 4.30⋅10−06 7.33⋅10−01 7.79⋅10−06 Near SCHIP1, ILI2A
rs6800685 190139275 T 5.61⋅10−02 2.10⋅10−01 1.12⋅10−05 Near CLDN16, TMEM207
  1. aChromosome; bBase-pair position according to UCSC version hg19; cMinor allele; dMain effect of nuclear SNP; eMain effect of mitochondrial SNP; fInteraction term
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