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Table 3 Results for the top 10 nuclear SNPs on chromosome 3 according to p value for interaction with rs2853495, sorted by chromosomal positions

From: Male-specific association between MT-ND4 11719 A/G polymorphism and ulcerative colitis: a mitochondria-wide genetic association study

Chra Nuclear SNP BPb A1c p Gene
Nucleard Mitoe Interactionf
3 rs7620175 35155767 T 6.5810−02 4.2510−01 8.4710−06 LOC101928135
rs12493494 60412390 T 1.4110−03 4.3710−06 1.5710−05 FHIT
rs505014 62731917 G 2.1210−04 1.1110−01 5.7810−05 CADPS
rs498746 62731985 T 2.6410−04 1.4810−01 9.2610−05 CADPS
rs4676732 121314320 T 2.7410−02 9.3110−02 6.9910−05 FBXO40
rs6784995 122938098 A 7.0410−04 9.1310−07 3.3710−05 SEC22A
rs9289215 122962809 A 2.7210−03 1.3710−06 8.3610−05 SEC22A
rs6784930 123001494 A 1.7610−02 1.2110−06 1.0310−05 ADCY5
rs17809756 159630084 A 4.3010−06 7.3310−01 7.7910−06 Near SCHIP1, ILI2A
rs6800685 190139275 T 5.6110−02 2.1010−01 1.1210−05 Near CLDN16, TMEM207
  1. aChromosome; bBase-pair position according to UCSC version hg19; cMinor allele; dMain effect of nuclear SNP; eMain effect of mitochondrial SNP; fInteraction term