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Table 1 Oligonucleotide primers and fluorogenic probes for MAP detection

From: Presence of intestinal Mycobacterium avium subspecies paratuberculosis(MAP) DNA is not associated with altered MMP expression in ulcerative colitis

Designation

Sequence

Reference

F57 forward

5'-FTA CGA GCA CGC AGG CAT TC-3'

Schönbrücher et al. [20]

F57 reverse

5'-CGG TCC AGT TCG CTG TCA T-3'

 

F57 TaqMan ® mgb -probe

VIC -CCTGACCACCCTTC-MGB

 

F57 TaqMan ® mgb -IAC

NED-CGAGTTACATGATCCC-MGB

 

IS Mav2 forward

5'-CGG CAA AAT CGA GCA GTT TC-3'

 

IS Mav2- R reverse

5'-TGA GCC GGT GTG ATC ATC TTT-3'

 

IS Mav2 TaqMan ® mgb -probe

FAM-CGC TGA GTT CCT TAG-MGB

 

TJ1 forward

5'-GCT GAT CGC CTT GCT CAT-3'

Bull et al. [21]

TJ2 reverse

5'-CGG GAG TTT GGT AGC CAG TA-3'

 

TJ3 forward

5'-CAG CGG CTG CTT TAT ATT CC-3'

 

TJ4 reverse

5'-GGC ACG GCT CTT GTT GTA GT-3'

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